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PROFASI

PROFASI (PROtein Folding and Aggregation SImulator) is a C++ program package for Monte Carlo simulations of proteins. It provides a set of tools for running simulations and analyzing the generated data. The model implemented uses an all-atom protein description, torsion angles as the degrees of freedom, and a simplified implicit solvent force field.

PROFASI is freely available under GNU General Public Licence (version 3). The current PROFASI version number is 1.5.

If you would like to get a copy of the PROFASI code, please go here:

Documentation, references and a tutorial for PROFASI can be found here:

Contact

For corrections and updates, please contact webmaster [at] atp [dot] lu [dot] se

See also: Staff pages